rs49367962 SNP Detail

Summary

• ID
  rs49367962
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129895949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGACACTG CTAATCACCT
  TTAAGAATTA TCTTAAGCAT CACTTGCTCC ACAAATCCAA AAGCACAAAA ACCAAAAGGG
  TCTCAGAGGC TACCACCCAT GTGCCACTGG ATGATGATGC TATGAGGGTT TTTGCTCGCT
  TGCTTGCTTG TTTTGGGTTT TTGTACATAC CCATAGCATC TGTGTATCTA CATCCAGAAC
  Y
  GAATCATGAA ATGCCCCAGA AGATGCAGTA AAGAGAAAGT GACTGGAGGG ATGGCTCAGC
  CACTAAGAGC ACTTTTTGCT TTTGTAGAGG ACCCAGGTTT GATTCCCAGG ATCCACATGG
  CAGTTCACAA CTACCTGTCA CACTAGATGC ATCCAGGATA TCCGATGGCC TCTCTTGGCC
  TCCCTCGGCA CTGTGCAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135891738	ENSMUSSNP2104443	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49367962					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129895949 () rs orientation: forward

Symbol	Name	Function Class
Rr585133	regulatory region 585133	1058 bp proximal
Rr585134	regulatory region 585134	1289 bp proximal
Rr585135	regulatory region 585135	1375 bp proximal