rs49367095 SNP Detail

Summary

• ID
  rs49367095
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149067369 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAGGTCTT GAGCCAGTTG
  CCCAGGCCAG GCACAGAGGG ACAGGACGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
  AGAGAGAGAG AGTGTGTATG TGTGTGTGTG TGCATGCGCG CTCTGACTTT GCCACTCAGC
  TTATCCAGAA AGCAAAATGA CTCTCTCAAT ATGACAATGA TGCCCAGCCT CGGCCTGGCC
  S
  ACTCTAGCTG ACCACAGGAG AGCATATGGT GCTGGCTGAT GAGGAGGGAC CACCAGCCCA
  GCTGCAGGCA AGCCTGCTCA AAACGCTGAT AAGGGGAGAA GGAAGAAGAG TTCAGAACCC
  ACCATTTTTT TTTAAAGATT TATTTATTTA TTATATGTAA GTACACTGTA GCTGTCTTCA
  GACACTCCAG AAGAGGGAAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss148024596	ENSMUSSNP4109259	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321424105	CHEV_4_148357021	CHEVERUD	SCREENING_POP	f	SNP		C	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs49367095					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149067369 () rs orientation: forward

Symbol	Name	Function Class
Pex14	peroxisomal biogenesis factor 14	Intron
Rr1858	regulatory region 1858	1822 bp upstream
Rr604813	regulatory region 604813	388 bp distal
Rr604814	regulatory region 604814	1824 bp proximal
Rr604815	regulatory region 604815	1984 bp proximal