rs49328452 SNP Detail

Summary

• ID
  rs49328452
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135579524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCCATCCC AGCCTTGGCT
  ACACGAGAGT CCATCTCATA AAAAGACAGG CAAGGGAAGA GGGATCCGAA CCCAGCCAGC
  TTACTGCTTG CTGCTCGGGC ATGAGGACCT GGGCCACGCC TGTAAGCCCA GCAGAGACAG
  ATCCCTGCCA GTTTGGCAGA ATCTGATAGC TCTGGGTTCT ATGGGCGGAA CCCTCTGGAG
  R
  CATGCTGTAC TTTCAGATAT GTTTGCTCCT AACGTAGCTA ACGGGAATAA ACTAAATTAT
  AATTAAGAAT AGCTAAGGAA TTAAACACCA AAACCAAAAA CCGGGTTGGC AACATGGCTT
  GGCCAGAAAG GTTGTCATGC AAGCCTGGAT ACCTCAGTTT GTTCCCCAGA ACCTATGTAA
  AGATAGGAGA GTATGGATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147552038	ENSMUSSNP4542426	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49328452					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135579524 () rs orientation: forward

Symbol	Name	Function Class
Gm13000	predicted gene 13000	1465 bp upstream
Gm69173	predicted gene, 69173	within coordinates
Rr602158	regulatory region 602158	within coordinates
Rr602159	regulatory region 602159	1790 bp proximal