rs49327696 SNP Detail

Summary

• ID
  rs49327696
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83359494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACGGAACG GAAAGAATAA
  GGCTCTGTGG TTATGCTCAG GGTAACTTCT TTCTAACCCC TTTATTTCAC TTGGGGCAAG
  CCATGGTGGT CACAGCTATA CTTCTTTCTT GAATTTATTT GGAGCTAATA GGTGACAGTC
  CCTGAGCAAG GGAGGCTTGT ATGACTGACA TCATTTTCCC CTAGAGTTAA TTTGCCTTGT
  R
  TCTGGCATAA CTCACTACTT TTCCTTACTG AGTATAAATA CTGTCGTGTG TCATCAGATA
  GTTCATGAAG TCACCACACA TGCTTCTATT ATGGAAAGCA ATGACCCTGG GCTTAGGGAT
  CTTAAACATC CAATTGCCCA CCATCCTCTC TTTACTCAGC AAGGAATGAA AGAGGAAGAG
  TTAGGATTTA GGTCATTATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135415352	ENSMUSSNP2774322	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49327696					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83359494 () rs orientation: forward

Symbol	Name	Function Class
Rr578862	regulatory region 578862	1169 bp distal
Rr578863	regulatory region 578863	1287 bp proximal