rs49326546 SNP Detail

Summary

• ID
  rs49326546
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:67418942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTG CACTTGGCGC TGTATGGCCC
  M
  GGGGACACAT TTTGCTCCTG CTTCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135258333	ENSMUSSNP3858395	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49326546					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67418942 () rs orientation: forward

Symbol	Name	Function Class
Rarres1	retinoic acid receptor responder (tazarotene induced) 1	Intron
Rr577934	regulatory region 577934	1245 bp proximal
Rr577935	regulatory region 577935	1394 bp proximal