rs49322756 SNP Detail

Summary

• ID
  rs49322756
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121079655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACTACGGGG AAACGTTTCT CGTCCAAACC GCTATACCAG
  TCTTTCTTGA TTCTCCTTCA GTTCCCAAGA CTTTTCCATC TCCTTTCTTT GATTGCTCAG
  Y
  CTCCTCTCCT CCACTAAGTG GCAGCAACCC CAGACAGACT CTTCTTTATC CAGGACTGCG
  GTGGTGAATA TTGGTTGTCA GCTTGACAGC ACCTAGAAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135717558	ENSMUSSNP3159742	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49322756					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121079655 () rs orientation: forward

Symbol	Name	Function Class
Rr375663	regulatory region 375663	1721 bp upstream
Rr584034	regulatory region 584034	339 bp distal
Rr584035	regulatory region 584035	472 bp proximal
Rr584036	regulatory region 584036	1025 bp proximal
Rr584037	regulatory region 584037	1358 bp proximal