rs49319095 SNP Detail

Summary

• ID
  rs49319095
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114441314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAGACAT AACACATTCT
  CACATGTGTA AGCTAGGATC TGAATCTGTT TCAACTATAC AGACTTTAAT TTTATACATT
  TCTAGAGGCA CATCCTGAAT CTAGCCCAGT AATCTAAGTT CATTCCTACA TATACCCTTG
  ATTTCAATCT CCAAGTTAAA GCAAGCAATT TTGAAAGCCT TGGGCTTATT CTACATCCTA
  A
  TGTCAATCAA TCTGCCAGTG CACCTAAGGC TCCCAAACAA CTGTTTACTG TTCAGTACAT
  TTTATTCAAT AATAGTAGCA GAAGTGATCT GCATTTTTAT TTTATGAAAT ATGATAATTC
  TAGGAATTAT TTAAAGATTT TGGTTTTTAG TCTTTCTTAT ATTACATCTA GACCACAGCT
  GCCAGAGCAT CCTCTCTTCC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss138784430	ENSMUSSNP1228808	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49319095					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114441314 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	1313 bp downstream
Tssr3975	transcription start site region 3975	1797 bp downstream
Tssr118082	transcription start site region 118082	1812 bp downstream