rs49286378 SNP Detail

Summary

• ID
  rs49286378
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108177860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGGCCGGG ACTTCTGATT
  CCATCCATCT GAAGTGTAAG TTGAGGGCTT GCATTTCTAG CAATTCCCTG GGTAGCAGGC
  AGTGCTACTG CCGTTGCTGC TGCTGATCTG AAGGGCAGCT CTGTGAGAAC CCTGAGTATT
  CCTCAAAAGT CAAGCAGTCC TCCCTAATTG CAATTGAATG ATCTTAAGCA ATTTCCTTGA
  R
  TTTTAAATTT TAAGTTTTTC ATCTACCAAA AAGGGTAATG AAACCCCTCT CTTAGGATGG
  TGATCTGCAG GGTGATCTAT ACTGAGGCTA CTGTAAGACC TCAATAAATG CTTTCTATTG
  CTGGCAAGAT GGCTCAGCAC CAAGAATAAA GACACCACGG AAGCATCATG GCCTGAGTTA
  GATTCCTGGA ACCCACATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133497282	ENSMUSSNP6000839	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49286378					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108177860 () rs orientation: forward

Symbol	Name	Function Class
Rr636050	regulatory region 636050	1712 bp distal