rs49257784 SNP Detail

Summary

• ID
  rs49257784
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131509002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAATCACCC TGCCTGTTAT
  TCACTCGGTC ACCATGCCAC TTATCAGATG GGCTATTCTG GTATCATGAT GTTTGTGCTT
  TTTAAAGTCA TGAAGGCCTG AGAACACTGC TGCCACAACT CTTATCTCGG TACACGGTTA
  TATTGTTCTA TTTTTATCAT TGGTTATCAT TAACCTTTTA CTGTGCTCCA TTCATAAATT
  M
  AACTTTATCT TAGGGACTCT GTAAGGAAAA GACTGTTAGA TTTTATAGAT TCCACAATGT
  CTTGTAATGA ATATATATCC CTTGTGGGTG TATGGGGCTA CTGTAAACAA TTTTCTTTTG
  ATATTTACCA TTTTTGTTTA AGTCCACTTA AGAACTCCCA CAGGATAAAA CATTAAATTA
  GTTTATCTGA GTTCTTTTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135905481	ENSMUSSNP4242498	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49257784					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131509002 () rs orientation: forward

Symbol	Name	Function Class
Rr375748	regulatory region 375748	736 bp downstream
Rr585381	regulatory region 585381	35 bp distal