rs49248098 SNP Detail

Summary

• ID
  rs49248098
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:85742732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGGGAAGAC CACTTTGTTC TTGTGAAGCT GGTGTTGCCA
  CCCTCAGATT CTAAAGTTTA GATGCAGGGA CGACGCCATT GTCGGGTTCC AAGGAGCCTC
  Y
  TGTGGGTCTC CAGAACTTCC TTTCTGGCTG AGGGAGGGAG CAGTCGGTTG TAGTAAGAAG
  CACTGAACTC GTGGGGGCGC TCGTTCCTAA GAAGACAAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133352633	ENSMUSSNP6857221	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49248098					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:85742732 () rs orientation: forward

Symbol	Name	Function Class
Nat8f3	N-acetyltransferase 8 (GCN5-related) family member 3	Noncoding-Transcript-Variant
Rr633261	regulatory region 633261	1809 bp distal
Rr633262	regulatory region 633262	63 bp proximal
Rr633263	regulatory region 633263	309 bp proximal