rs49225529 SNP Detail

Summary

• ID
  rs49225529
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4407910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGGAATC CTCAAAAACA
  AAGAAAGGTG TAAGAGTCTT AAGAAGGAGA ATAGAATTCC ATAGCACCTT AAGAGACTAC
  GAATGTGCTT AAAGACACAA GTGGACGAAT GATAGGAGAT GAAGAGACAA TATGGATATT
  TGACTCTCTG GCCATAGAAC CCAACGCATA CACCATACTA CTGTACTAAG TTGTGATGCT
  R
  AAATTGGCCA GTAGAGGGCA TAAAACACTT CCACCTCTAC AATTCTCCCC CAGCATCCTT
  TACTACTACT GGATGGAGCC CTTTCAGATG CTGAGAACCA GTAAGCAAGA GAACTGCTTG
  AGACAAGAAC ACTCTGTAAA CAGAGTTCAT TTCCTTTGCC TTAGTGATCT TATGTGGAAA
  CAAAATAGTC ATTTGATTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss132931520	ENSMUSSNP1256974	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs49225529					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4407910 () rs orientation: forward

Symbol	Name	Function Class
Rr626010	regulatory region 626010	within coordinates
Rr626011	regulatory region 626011	4 bp proximal