TTATT ATCACACCTC TGGAAACAAG C CAAGGCTTTG ACAAATGCTA CTTGG C = C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss146402112 | ENSMUSSNP1986110 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | ||
ss325809390 | CHEV_19_41439692 | CHEVERUD | SCREENING_POP | f | SNP | C | C | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs49222772 | SNP | C | C | C | C |
Location: Chr19:41353641 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pik3ap1 | phosphoinositide-3-kinase adaptor protein 1 | Intron | ||||||
Rr547615 | regulatory region 547615 | 476 bp proximal | ||||||
Rr547616 | regulatory region 547616 | 1175 bp proximal | ||||||
Rr547617 | regulatory region 547617 | 1941 bp proximal | ||||||
Tssr159300 | transcription start site region 159300 | 1549 bp upstream | ||||||
Tssr159301 | transcription start site region 159301 | 1350 bp upstream | ||||||
Tssr159302 | transcription start site region 159302 | 1267 bp upstream | ||||||
Tssr159303 | transcription start site region 159303 | 1245 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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