rs49204526 SNP Detail

Summary

• ID
  rs49204526
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136641847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTT GCTGCCTGTC AGCATCTTCC
  A
  TAGAGACTGG TGCCTTCAGC TTAGC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147585106	ENSMUSSNP5260939	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321359233	CHEV_4_136470451	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs49204526					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136641847 () rs orientation: forward

Symbol	Name	Function Class
Gm69228	predicted gene, 69228	1569 bp upstream
Rr602498	regulatory region 602498	1382 bp distal
Rr602499	regulatory region 602499	358 bp distal
Rr602500	regulatory region 602500	207 bp proximal
Rr602501	regulatory region 602501	1855 bp proximal