rs49200689 SNP Detail

Summary

• ID
  rs49200689
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137710799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAA TTTGTTCCAT AAGACAACAC
  C
  TAAGTTATTA ATTTGTTTTG GTTCT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321369443	CHEV_4_137539403	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs49200689					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137710799 () rs orientation: forward

Symbol	Name	Function Class
Rr602808	regulatory region 602808	1247 bp distal
Rr602809	regulatory region 602809	766 bp proximal
Rr602810	regulatory region 602810	1737 bp proximal