rs49191016 SNP Detail

Summary

• ID
  rs49191016
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144925740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATAAGGT TCATTTTAGC
  TTACAGCTCC AGAGTAGATA TGGTTCATCA TGCAGCAGGC AAAGAAGACA TGGCTATCAA
  AGTGGGTAGC TGGATGATCA CATTCCATCC ACACACAGAA AGCAGAGAAA CAGAACAGGG
  AGTTGGACCA CATTATCAAA CCTGAGAGCC AGTCTTTGAT GACTACTCTT AGCAAGGCTC
  Y
  CTTATGGTTG TACACTTTCC TAAGACAGCA CCACCTGGTG GGGACCAAAT GTTATAACAT
  ATGAGCCTGT GGTGGACACT TCACATTCAG CCCAGAGCAA TCTCCAGGTT TATCTTTCTT
  AAATGGACCA AGAGAAGATT GGGGTTCACT AGAGAGAGAA AGTATTTGTG GATTTATAAG
  GAATAAATAA AACAGTATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss136035834	ENSMUSSNP6113164	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs49191016					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144925740 () rs orientation: forward

Symbol	Name	Function Class
Rr586766	regulatory region 586766	25 bp proximal