rs49187247 SNP Detail

Summary

• ID
  rs49187247
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134701752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTC TGCTCCTGGT GGGTGGTGGG
  Y
  TACAAGGAAG GTTAAAGTGT TTAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147539243	ENSMUSSNP6891992	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss321350241	CHEV_4_134530356	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49187247					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134701752 () rs orientation: forward

Symbol	Name	Function Class
Gm68620	predicted gene, 68620	within coordinates
Rr601887	regulatory region 601887	727 bp proximal
Rr601888	regulatory region 601888	907 bp proximal