rs49174047 SNP Detail

Summary

• ID
  rs49174047
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137712340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTTCCAGA TTCCAGCTGG
  GATGTGCCAG TCAGAGAAGA CCTTTCACCG GGATGAAGGT GGGGCAAGGG AGGAAGCCAG
  GAGCCAGCAA GGCCACAGGT CACCCTGTCC TCTGGTGCAG CCACTGCCAT CAGAACATGC
  CGAGTGACTT GCCAGACAAG GAAGAAGAAA ATGGGCTCAT CTGTTACTTT CAACCATGGA
  A
  TCTGTAGCGG GATGTTGACG GTCTTGGGGC AAGTGGTGTC TGTGATGTTT TGTCTCTTAT
  CCACGACAAC TTTAGAAGGC AAGTTTGCAT CTCTCCCCAC TCCTCCCAGT TCACTCTGGT
  CTCAAACTTG CAGCCCTTCT GTCTCTGGAA GAACATCAGA CCTCAATCTC AATGTCTTTG
  TCCCCCTACT CTGTGGTGTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147628192	ENSMUSSNP4075838	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs49174047					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137712340 () rs orientation: forward

Symbol	Name	Function Class
Rr602809	regulatory region 602809	440 bp distal
Rr602810	regulatory region 602810	196 bp proximal