rs49173786 SNP Detail

Summary

• ID
  rs49173786
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:61270076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CATGAACAGC CAGGGCCACA CAGACAGGCA GACAGACAGA
  CAGGACTGTG TACGCAGGCC TGAGCACAAG GAGCCACCTC CATGCACAGC CAGGGCCACA
  T
  AGACAGACAG ACAGACAGAC ATACAGACCC TGAGATCTTA AATAAAGACA GTTAAAGCTC
  CTAGGATGCT TTGCTGGCTG TGTGTGTGTG TGTGTGTGTG T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss146421728	ENSMUSSNP4403346	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49173786					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:61270076 () rs orientation: forward

Symbol	Name	Function Class
Gm70405	predicted gene, 70405	within coordinates
Rr593220	regulatory region 593220	888 bp distal