rs49167617 SNP Detail

Summary

• ID
  rs49167617
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7730883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGGGCAAG GCTCATGAGG
  GAGAGGCAGG ATTGGTGGAA ACACCACAGT GAGGGGTTGA GGCAAGAGAT TAAAATGATC
  TTAGATGCAA TTTGCCTTTA GATGTTTTCT AAAGATGAGC TGTGCTACTT TCCTATGGTT
  GCTGTGTCAG CACAGCACAA ACTGTGACTT ACACGCAGAA AGAAAAGAAA ACGATTAAAC
  T
  TATTGGATCA GAGCTCCTAA TATTGAGGAA TCAGTAGGAT TCCGTTGCTT TGGAGGCCGG
  AGAGAAAATG CTATTTCTTT GTATGCCCCA GCTTCTAGAG ACGACCCATA TCCCAGACTC
  ACAGCCAATT CCTAATTCAC CTTCAGCTTC TGTTTCTGTC ATCCTTGTCC TCAAAGGCTT
  CTGCTTTCTG CTCACAGTGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss132954057	ENSMUSSNP232769	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49167617					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7730883 () rs orientation: forward

Symbol	Name	Function Class
Rr626314	regulatory region 626314	1289 bp proximal