rs49167137 SNP Detail

Summary

• ID
  rs49167137
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:133999708 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTGCACACC TATAACCCAT GCCCTTGGAA GGTAGAGGCA
  GGAGAATCAG GAATTCAAGG TTATTTTCAG ATACCTAGTT TGAAGTCAGT CTAGAGTAAA
  G
  AAAACCCTCT CTCAAAAAAG AATTTTTTTT TCAAATTGAA GTACAATAAT ATATCTGAAG
  TATAAAAATT GTATGTGTTA AAATCAGGAG CACTTGCCT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147522796	ENSMUSSNP7109528	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321346308	CHEV_4_133828312	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49167137					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:133999708 () rs orientation: forward

Symbol	Name	Function Class
Gm69734	predicted gene, 69734	1232 bp upstream
Rr398573	regulatory region 398573	963 bp upstream
Rr601619	regulatory region 601619	742 bp proximal
Rr601620	regulatory region 601620	1061 bp proximal
Rr601621	regulatory region 601621	1243 bp proximal
Rr601622	regulatory region 601622	1253 bp proximal