rs49165785 SNP Detail

Summary

• ID
  rs49165785
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119821197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTGT CAAGATCCTG TAAGGAGGCT
  W
  GCAAAATGGC TCAGCAGGTA AAGAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147347355	ENSMUSSNP2605788	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss320478203	CHEV_2_119816452	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49165785					SNP	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119821197 () rs orientation: forward

Symbol	Name	Function Class
Mapkbp1	mitogen-activated protein kinase binding protein 1	Intron
Rr563617	regulatory region 563617	1678 bp proximal