rs49151513 SNP Detail

Summary

• ID
  rs49151513
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:147950353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAT CAAACGTGTC ATCTCGACGA
  M
  TGTCCAGTGG GTCCAACATG TGTCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147985300	ENSMUSSNP2474015	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	A
ss321415374	CHEV_4_147240005	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49151513					SNP	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147950353 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Miip	migration and invasion inhibitory protein			Coding-NonSynonymous
				Noncoding-Transcript-Variant
Rr604509	regulatory region 604509			522 bp proximal
Rr604510	regulatory region 604510			1638 bp proximal