rs49150614 SNP Detail

Summary

• ID
  rs49150614
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:123032065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCACAACAT ACTGTCTGTA
  AATCAGTCAT TGTGAATAGG GCCCACTCTG ATTATCTCAT ATCAACTAAT TACCATTTTA
  AAGATGCACC TCCAAATATA ACCACATTCT GAAGTATGGG GGACAGGATT TCTACATAGA
  AATTCAGGGA ACCATAATTC AAACCTAAGA GTGAGGAATA TAGAGGCAGG AAAGATGGCA
  Y
  CCAAGTTAGG GTCACTGGCT TCTCTGGCAG TGGACCCAAG TTCCCAGAAT CTAATCAGGT
  GGCTCACAAC TGCCTGTGAC TCCACTTCCA CTCTGTCTCC ACAGGTACCT TCATACACAT
  ACTATACACA CACACACACA CACACACACA CACACACTGT GCACACATAC ATATAAACAC
  ACTGTGTGTA CACACACATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135760965	ENSMUSSNP5411574	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49150614					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:123032065 () rs orientation: forward

Symbol	Name	Function Class
Rr584475	regulatory region 584475	1990 bp distal
Rr584476	regulatory region 584476	915 bp distal