rs49143631 SNP Detail

Summary

• ID
  rs49143631
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136858591 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTA TATAGTCAAA GGACAAAATT
  A
  CTTGGAAGAT TGTCACCTCT GGCTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135938756	ENSMUSSNP788127	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320975051	CHEV_3_136815794	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49143631					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136858591 () rs orientation: forward

Symbol	Name	Function Class
Rr375787	regulatory region 375787	within coordinates
Rr585922	regulatory region 585922	1839 bp distal
Rr585923	regulatory region 585923	481 bp proximal
Rr585924	regulatory region 585924	1447 bp proximal