rs49131624 SNP Detail

Summary

• ID
  rs49131624
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:66988780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTTAAAT ATAATTAAAA
  TTAGCCACTT TAATTATATT GGTACCCTTT TTGTGGTACA GGTGGGAAGG GGGACATCTG
  GAAAGAAAAG TCTCACAAGC AGCATGGAAT GCAGAATACT GGGTTGCCTG GGAGCCATCA
  TTTCTAGTTC CAGATGCCTC ACCTTTAAAG CAACAGTAAA AACTTCACGC AGGGTTGTAA
  T
  AAGGCTTCCT GAAAGACTGT ATGAAAGCAA CAAGCAAGCT CCTGGTTTTC ATGAGGATGC
  CACATGGTAT TTACCCTGGA AGCTCTGCTT GGATAAAGCA AGCTGATGCA TAGACGGACA
  GCCTGGCGCT CCTGCCCAGG AGAGAATAGA AACATTTGGG GGTGTTTTCT ACCACTGTGG
  TCCTGCTCTG CCCCAGGACA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133265556	ENSMUSSNP2037266	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49131624					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:66988780 () rs orientation: forward

Symbol	Name	Function Class
Gm15644	predicted gene 15644	689 bp upstream
Gng12	guanine nucleotide binding protein (G protein), gamma 12	Intron
Rr379521	regulatory region 379521	1841 bp downstream
Rr631574	regulatory region 631574	1243 bp proximal