rs49101481 SNP Detail

Summary

• ID
  rs49101481
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:32242079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGGGGAT CATGAGAGGA
  AGCCTGGTAA GGTCAATCTA GGGCTTGAAG CCCTTGAGAG ACAGAAGGGA CAGTAGGAAC
  TTCTCCAGGC TCTGTCATGT AGCCATGCCC CCCCACCCCC AGAAGGAACT GTAGCCATCA
  GTCACATAGG GGCCCACACC CACAAGTCCC TCCTCATGTA GATGAGGCAT CTCAGGCCAA
  S
  CCAATAGGAA GCACCCTATT ATCAGCTCCA ACCCACCCCA AAACTATATA TAAAATCCAG
  AAGGAAAGTA TATGAGAATC ACCCCATCAT CTGAGAGCAT CTATCACAAG AGCTGTAACA
  CGCCTAGAAA GAGAATGCTC TCTCAAAGAT TTCACCACCA GAAGTTTCCC CTGCACTCTG
  CTCTAACCAG CCCCTCTCCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134746324	ENSMUSSNP6775535	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49101481					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32242079 () rs orientation: forward

Symbol	Name	Function Class
Kcnmb2	potassium large conductance calcium-activated channel, subfamily M, beta member 2	Intron
Rr574931	regulatory region 574931	677 bp proximal
Rr574932	regulatory region 574932	791 bp proximal
Rr574933	regulatory region 574933	1227 bp proximal