rs49092013 SNP Detail

Summary

• ID
  rs49092013
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130589200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAAACCCA GGCTCCAGCC TTCATGCCCA GGTCATGGAA
  TGTCCCAGCC GCCCGGCCTG AAGCAAGGAC CATGGGTCAG CAGTAGTTTC CAGACTTCCT
  S
  AGCTACTTTT TCAGTAACAG TTCCCAGACC TTCCCAGCAG GTTTCCAGCC CCCACACCTC
  AGTAATGGGA TGTCCCTAGA GACGGACCCA ACAGATTTA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135899893	ENSMUSSNP7153551	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49092013					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130589200 () rs orientation: forward

Symbol	Name	Function Class
Gm36443	predicted gene, 36443	within coordinates
Rr585209	regulatory region 585209	1528 bp distal
Rr585210	regulatory region 585210	1201 bp distal
Rr585211	regulatory region 585211	962 bp proximal