rs49073409 SNP Detail

Summary

• ID
  rs49073409
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136023101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCGCTCTTC TAGAGCACCT
  GGGTTTGATT TCTAGCACCC CTATGGCACT TCCAAACCAT CTATAACTCC AGTCCTAGGG
  GATTGGATGT CCTCTGGTAC TGTTTGTGGT GGACAAACAC ACATTAGGCA AATCCTCATT
  ATACATTTAA AAATAATTGT AAAGTTAAAA AAAAAAAAAA AGCTGGGCAT GGTGGCGCAC
  R
  CCTTTAATCT TAGCACTCAG GAGGCAGAGG CAGGCGGGAT CACTGAGTTC CAGGTCAAAC
  CAGTCTACAG AGTGAGTTCC AGGACAGCCA AAGCTACACA GAGAATCCCT CTCTCAAAAT
  GAAAAAAAAA AAAAATAGAA AGAAAAGTGT GGGGGCTGCT GGGAATGCCA TCAGTAGAAC
  AGTGGGTACT TAGCATGGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147564857	ENSMUSSNP4940180	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49073409					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136023101 () rs orientation: forward

Symbol	Name	Function Class
Rr602345	regulatory region 602345	1034 bp proximal
Zfp46	zinc finger protein 46	1848 bp downstream