rs49073229 SNP Detail

Summary

• ID
  rs49073229
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17943344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGCAGAAC TCGTCTCTCT
  GCAGAGCCCA GAGCCCATGA CTTGGTAGCT GGGATACTGT TCAGTGGTAG AGTACTTACT
  TGCCTTGCAT GGGGCCCTGG TTTCTGTGTG CCCAACATTA CAAAAACAAA CGAATAAACA
  ACTGAGAGAG GAAAGGATGT AAATAGAGTC ACAAAAGCAC TAGCCCCAAA CAGAGTGTGC
  R
  CACATGCCAA ACAGACACAG GGAAGTCAGG TTTTCAAGGT GGGTTTAAGC TCCATTGAAA
  CACACATCTG TGCCTCAGTA GGTTGTTATA GCTTTGTGGA CAAGAAGCCA CAGACCAGCA
  GTCTGTCCCA GAACCTGGCT GCTTACACCC TTGTTGCCGT CTCAAACACT TCATCCAAGA
  GTACCTTTTA AGCTTTCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133025430	ENSMUSSNP5284917	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49073229					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17943344 () rs orientation: forward

Symbol	Name	Function Class
Rr626887	regulatory region 626887	453 bp proximal
St7	suppression of tumorigenicity 7	322 bp downstream