rs49050759 SNP Detail

Summary

• ID
  rs49050759
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131591987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTGTTGTT GTTGCAGTTG
  TTGTTGTTGC AGTTGTTGTT GTTGTAATAG TTACATTAAA GTATATTCAT CAGCATCACA
  ATTCAGGAAA CCTAAACATT GATTATATTT CTATTATTAG AGAACACCTT TTCTATTTTC
  TTTCCCCTCC TTTGAAGTGC TTATTCATCT TGATTTTGTT GCTTAGATAT AAACGTTTCT
  S
  ACCACTAAAT ATTATGAGTA AAATAAATAC TGCCTTTGAT TTTTCCTTCT GTCTTAAACC
  ATTTGAAAAA TCAGAACACT TTTTATCGTC TTGCTGAGAA CTCAGGCTTG GTTTTTAGCA
  CATAGTAAGT GGCTCACAGC TGCCTGTAAT GTTAGTTCTA GGAAATCTGA TACTCTCTTC
  TGGCCTCTTC AGGCATTGCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135905979	ENSMUSSNP6640924	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49050759					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131591987 () rs orientation: forward

Symbol	Name	Function Class
Gm65547	predicted gene, 65547	1379 bp downstream
Rr585388	regulatory region 585388	358 bp proximal
Rr585389	regulatory region 585389	435 bp proximal