rs49038795 SNP Detail

Summary

• ID
  rs49038795
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95184268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGAGTCAC TAGGAATAGG
  AGCTCACTTA CAAACAAAAA CAAACAGAAA ACAGGCTTTC CTTTCCCCCC TTTCCCTTGC
  TTATTTTTGG TTGTTTTCAA GACATGGTTT TACGCCTAGC TCCTTGGTTT TTTGTTTATT
  TGTTTACTTT TTCCAAGACA GGGTTTCTCC GTGTAGCCCT GGCTGTCCTG GAACTCATTG
  K
  GTACACCTGC CTCTGCCTGG GATTAAGTGA CAGGATTAAT GGTGTGTGTC ACCAGGTCAC
  CAGTACCAGT CCCTTTCTGG TCTTCTTTTT ACACAGCCCA GGTCTAGGAA CCTATTCTGT
  AGTCCAGGGA TCTTTCCAAC TCAACCTCAG CCACTAAGCC CAGCTATGTA GATTTCCTTT
  CAGTGGAACA CACTATTGTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135510470	ENSMUSSNP364070	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49038795					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95184268 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580884	regulatory region 580884	within coordinates