rs49031784 SNP Detail

Summary

• ID
  rs49031784
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:10346190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTGTGAAA TACTCCAACA GTGAAAGGGG GCTAAAGGGG
  GAGATGGTCC AGAAATTACT GAGCCAACTT CTGATGGTCA GCATTGGCCT GACTGGCACA
  Y
  TGCAAGTCCT CTGCATTATT GCAAATTTCT AGAAACTTTA TAGGAGTCGA ATCCGCATGA
  GTATAGATTT CATCTAATAT TTGTATTAAT TTTTCAAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss134580786	ENSMUSSNP3147520	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49031784					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10346190 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fabp12	fatty acid binding protein 12			Intron
				Noncoding-Transcript-Variant
Rr573601	regulatory region 573601			231 bp proximal
Rr573602	regulatory region 573602			1863 bp proximal