rs49025203 SNP Detail

Summary

• ID
  rs49025203
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149257525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CTGGGAAGAT TCCAGAATCC ACAAACAGGC TCACAACTCC
  TCTCCCAGGA GATCTGTTGC CCTTTTCTAA CCTTTTTCAG GCACCAGGCA TGCATGTGGC
  A
  CAAAAAAAAA AAAAAAAAAA ACAACCAAAC TACCATACCA CACATATGCA CCCCTCCCCC
  AATCTATGCT TTAACAGGAT CTTCAAAGTG CCAAAAAGTG A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148029239	ENSMUSSNP2050377	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49025203					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149257525 () rs orientation: forward

Symbol	Name	Function Class
Rr604853	regulatory region 604853	1024 bp distal
Rr604854	regulatory region 604854	692 bp distal
Rr604855	regulatory region 604855	59 bp distal