rs49014508 SNP Detail

Summary

• ID
  rs49014508
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81815923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAGTACTG AGGTGGATGC
  TTGCAGCCAG CCATTGGACT GAGCATGGGG TTCCCAATGG AGGAGTTAGA GAAAGAGCTA
  AAGGAGCTGA AGTGTTCTGC AACCCCATAG GAAGAACAAC AGTATCAACC AACCAGCCCC
  CCCCCCCCCC AGAGCTCCCA GGGACTAAAC CACCAACAAA AGAATACACA GGGAGGGACC
  Y
  ATGGCTCCAG CCACTTTTGT AGCAGAGGAT GGCTTGTAGG GTCTCAATGG GAGGAGAGGC
  CCTTGGTCCT GTGAAGGGCT GATGCCTGGT GTAGAGGAAT GGGTGGGGAG GCAGGAGTGG
  GTGGGTGAGT GCAGTAACAC CCTCATAGAA TCAGGGGGAG GGGGATGGAA TAGGGGGTTT
  TCGTGGGGGA AAACCAGGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135398610	ENSMUSSNP5395653	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49014508					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81815923 () rs orientation: forward

Symbol	Name	Function Class
Gm9989	predicted gene 9989	within coordinates
Rr375244	regulatory region 375244	1244 bp upstream
Rr578719	regulatory region 578719	1479 bp proximal