rs49013070 SNP Detail

Summary

• ID
  rs49013070
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17674882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACAAACG ATTTTACCGG
  AGAAAGAGGC TACAAGAGTG TGGTCAGAGG CTAACTTGCT GCAGTCTATT CTCTCCTTCC
  ACCATGTGGG TTTGGGGGAT TGAACTCGGG TACCAAACTC CTTTCCCCAC AGAGTCATCT
  GGCAGGCCAG GCTGAACATC TCTAATTACA CACACTGTTT GTCGTGGTTT GAAAGAGGAT
  T
  ACCCCCATAA CACTGCGTGT CTGAGTGCTC GGTCTGGCGT TAGTGGAACT GTTTGGGAAG
  AATTAGATGT GGCTTTGTTG GAAGAGGTGT AACACTGGAG GTAGACTTTG AGGTCTCAAA
  AGCCCATACT AGGCCCAGTC TTCTCCTCCT CCCCCTCTTC CTCCTCCTCT TCCTCCTCCT
  CCTTTCCCTC CCCTCCCTCT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133020158	ENSMUSSNP5021373	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs49013070					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17674882 () rs orientation: forward

Symbol	Name	Function Class
Rr399579	regulatory region 399579	565 bp upstream
Rr626829	regulatory region 626829	408 bp proximal
Rr626830	regulatory region 626830	691 bp proximal