rs49010836 SNP Detail

Summary

• ID
  rs49010836
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129084889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGA AATATTGCAT ACATCACTCT
  K
  TATGGTAGAC ATTTGAAGTC ATTAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147584226	ENSMUSSNP3566933	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss320504471	CHEV_2_129068705	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49010836					SNP	T	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129084889 () rs orientation: forward

Symbol	Name	Function Class
Rr373844	regulatory region 373844	within coordinates
Rr564887	regulatory region 564887	1038 bp distal
Rr564888	regulatory region 564888	118 bp distal
Rr564889	regulatory region 564889	41 bp proximal
Rr564890	regulatory region 564890	780 bp proximal
Rr564891	regulatory region 564891	1669 bp proximal
Rr564892	regulatory region 564892	1684 bp proximal