rs48972741 SNP Detail

Summary

• ID
  rs48972741
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:132685655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAAAAGGAA CGAACTGGCT GGCTAGGCCA TTTGGAGCCC
  AGAGGCTCGT GAGTGGGTTC CAGGCACTAA GTACTTAGCT TTTCACACTG CTGAACTTTG
  C
  CTTGGTTCTT CCCTCTTGAA TTAAGTATTT TACCTATTTA GGTTTGGTAG GAGCCCACAG
  TTAATTCGGA ACTTGTGAAG AGACTCTAGA GTTTCAGAA                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135915773	ENSMUSSNP1755785	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48972741					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132685655 () rs orientation: forward

Symbol	Name	Function Class
Gstcd	glutathione S-transferase, C-terminal domain containing	1858 bp downstream
Rr585492	regulatory region 585492	354 bp proximal