rs48970145 SNP Detail

Summary

• ID
  rs48970145
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142439293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTGCATGG GCTAATCCTG GAAACACAGC AGAAGGAAAC
  ATAGATCTCC TTGCTGTCTC TAATTCCTAA ATCCCTGGCG AGCTAGACTC AGGACTCAGG
  C
  AACCATCTGC AACTGTGACT CTTAAAAGTC ACTGGGGTAT TAGGAGATGA CTCTGTGGTT
  AAGAGGGCCT GCTGCTTTTG TAGAGGACCT GAGTTTAGT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147736713	ENSMUSSNP3145299	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48970145					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142439293 () rs orientation: forward

Symbol	Name	Function Class
Rr566224	regulatory region 566224	1739 bp proximal