rs48939014 SNP Detail

Summary

• ID
  rs48939014
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49447756 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTT CTAAGGAACA CTGTTATTGC
  G
  CACTATTTAT TTTAATCCTC AGTGA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135136672	ENSMUSSNP638739	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320750055	CHEV_3_49297229	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48939014					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49447756 () rs orientation: forward

Symbol	Name	Function Class
Gm22480	predicted gene, 22480	1829 bp downstream
Rr576096	regulatory region 576096	1567 bp proximal