rs48933191 SNP Detail

Summary

• ID
  rs48933191
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:41360281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTCT TGCTGTGTAG CCACAGTTGA
  A
  CTGGTAGTCA CTGGGAAGAC CAGGC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss144675387	ENSMUSSNP3246086	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322633632	CHEV_8_41992598	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs48933191					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:41360281 () rs orientation: forward

Symbol	Name	Function Class
Slc7a2	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	Intron
Tssr77023	transcription start site region 77023	1624 bp downstream
Tssr77024	transcription start site region 77024	1420 bp downstream
Tssr77025	transcription start site region 77025	1373 bp downstream
Tssr77026	transcription start site region 77026	963 bp downstream
Tssr77027	transcription start site region 77027	634 bp downstream
Tssr77028	transcription start site region 77028	529 bp downstream
Tssr77029	transcription start site region 77029	359 bp downstream
Tssr77030	transcription start site region 77030	656 bp upstream
Tssr77031	transcription start site region 77031	802 bp upstream
Tssr77032	transcription start site region 77032	1161 bp upstream
Tssr77033	transcription start site region 77033	1424 bp upstream
Tssr77034	transcription start site region 77034	1487 bp upstream