rs48932977 SNP Detail

Summary

• ID
  rs48932977
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148149181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCAGGTGT CCCCACCCAG
  TCCTTGGCTC CCTCTATCAG CAGGAGAGCC AGTGGCTCAG GCCACTCGCA CCAGTCCCTG
  GCCTCGCTCC TGGACTCTCC TGCACTGTCC ACCATCCCGC CAGCAGCTGC TTCCACAGAC
  CCATCACAGC CCCACAGTTC CAATTCCAGG CCCAGCGAGC AGCCAGCTCT CCCTGGGCCC
  R
  TGGAGTACCG CTGCTCCAGC TGAGGAGGAC ACTGGGGAGG AGGGGGAATA TCCGCTCTGA
  GCACAGCCCT TAGGCCAGCC TCACCTCTTC CTCCCCGCAG CAACAGGTAT GGCCTGGGTG
  GATCTTTTCC CGGCTCTGAT AAACAGATTA GAGGGGTCTG GGGCCCTTCC AAAGGACATA
  ATGACAGATG ACAGGACTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147991188	ENSMUSSNP1484735	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48932977					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148149181 () rs orientation: forward

Symbol	Name	Function Class
Gm13201	predicted gene 13201	within coordinates
Gm66468	predicted gene, 66468	within coordinates
Rr604572	regulatory region 604572	1107 bp proximal
Rr604573	regulatory region 604573	1245 bp proximal
Rr604574	regulatory region 604574	1483 bp proximal