rs48922870 SNP Detail

Summary

• ID
  rs48922870
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21986908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGATCACAAC ATGGGTTCTA GCCTGGAAAG GCATTTTGGA
  AACCTGGAAG AGAAGAGGGG CTAGGTGGCG AGATAACGAA ATGTAGCTAA GACAGTCATT
  T
  TGATCAAAGC TCCATTTTTA CTGTTGCAAC ACTCAGTTAT GAAGGAAGGG GGAGGGGACC
  TGATTCCCGC CAAATAATCT CAGAGTCCAG TAGCAGGGTG A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136518449	ENSMUSSNP976668	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48922870					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21986908 () rs orientation: forward

Symbol	Name	Function Class
Gm31813	predicted gene, 31813	within coordinates
Rr367415	regulatory region 367415	1647 bp upstream
Rr574163	regulatory region 574163	426 bp distal
Rr574164	regulatory region 574164	98 bp proximal
Rr574165	regulatory region 574165	1856 bp proximal