rs48916207 SNP Detail

Summary

• ID
  rs48916207
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55683144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCTATATA CAACCACCAA
  ACCCAGACAC TGTTGTGGAT GCCAACAAGA GCTTGCTGAA AGGAGACTGA AAATGCTGTC
  TCCTGAGAGG CTCTGCCAGT GCCTGACAAA TACAGAAGTG GATGCTCACA GCCATCCATT
  GGACTGAACA CAGTCCCCAA TGAGGGAGCT AGAGAAAGGA CCCAAGGAGC TGAAGGGGTT
  Y
  GCAGCCCCAT AGGAGGAACA ACAATATGAA TTAACCAGTA TCTCCAGAGC TCCCAGGGAC
  TAAACTAAAT GGTGGGACTC ATGGCTCCAG CTGCATATGT AGCAGAGGAT GACCTAGTAG
  GTTATCAGTG TGAAGGCTCT ATACCCCAGT ATAGGGGAAT GCCAGGACCA GGAAGCAGGA
  GTGGGTGGGA AACCAGGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133214666	ENSMUSSNP6968233	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48916207					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55683144 () rs orientation: forward

Symbol	Name	Function Class
Rr406317	regulatory region 406317	1362 bp distal
Rr631016	regulatory region 631016	1765 bp distal