rs48915671 SNP Detail

Summary

• ID
  rs48915671
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:148218764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGCTTTA CTATCTGCCT
  GATTTTCTGA GTGCCTCCCA TTATACTAAG TACTTTGTTC CAGACATTGT ATTATTGCTA
  AAAATTCTAT CTCTTATATA TATATTTTTT ATTTCTCCAC TAGAAATTCT GCATTTTAAA
  CTATGAGCAT ATTTTCCTTT ACAATGTGGA GTATAGTCTC AGTAAGACTT CAGCATCCAC
  G
  ACTGTAATTC CAGTGCAGGA ACTGGCATTG TGCTCTCAGA TGTCATTTTC CTTGTTCTCT
  GTGTATTGAG AATTTGCTAC TGTGTCCAGA GCAGGGGAGA AGTCAATCAC AGTCTTTGAA
  GAGTGCTAAT GTTCTTTGTT TTAAAATGAT AGTGATCTGG GGATGCTTGC CACCCTCACA
  ACTGTGTGCA GCTCCGAGAT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147923841	ENSMUSSNP6540300	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs48915671					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:148218764 () rs orientation: forward

Symbol	Name	Function Class
Gm39957	predicted gene, 39957	within coordinates
Rr566887	regulatory region 566887	737 bp distal
Rr566888	regulatory region 566888	1313 bp distal
Rr566889	regulatory region 566889	932 bp distal