rs48914611 SNP Detail

Summary

• ID
  rs48914611
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140473410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCAC CTCTGGCCAG GACAGTCCTC
  R
  AGGGAGGCTG CCTGGGGTAG TGACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147711103	ENSMUSSNP1866562	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48914611					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140473410 () rs orientation: forward

Symbol	Name	Function Class
Padi4	peptidyl arginine deiminase, type IV	mRNA-UTR
Rr603536	regulatory region 603536	1122 bp distal
Rr603537	regulatory region 603537	1228 bp distal
Rr603538	regulatory region 603538	1667 bp proximal
Rr603539	regulatory region 603539	1794 bp proximal