rs48913286 SNP Detail

Summary

• ID
  rs48913286
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:81047099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCTGGCA AAGAATCACA
  TTTTAAAAAG TCTACATCTG AGGGAGCTTG CTGGAATATA GACATGCTCT TGGTACACAT
  ACTTGATCCC CCTAGCTGTA ATACAGACAC AACTTTAATT CCTCTGGATG GAATAAAAAC
  ACACCTTTAT TACACACCTA AGTTAAGTTA GTTGATGGAA GTAACCATGT TTGAAGGTGC
  Y
  AACTAATTAA GAGGCAGACA AAGTGACGAA TCAGAGAAAG ATTTGTCAGA GTGAGTCTGA
  AATAGGATAT ACCCAACTCT CATGAGAACA GACAGGGAAG AAAGGCTAAT TGAGAACAGT
  ACAGAGTAAG TCAGTCGAAT GCAGTTGAAT TCAGTTCAGT CAGTGTCAGA GTCAGTGTTT
  GCTGGGTTCC TTAAGCAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146846480	ENSMUSSNP5777950	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48913286					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:81047099 () rs orientation: forward

Symbol	Name	Function Class
Rr594198	regulatory region 594198	937 bp proximal