rs48911988 SNP Detail

Summary

• ID
  rs48911988
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125373696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAATGGAT AGTTTCCTTC
  AGACCTTCTG TTCTCTAAAA TCCATCAAGT TCCTCATCTT TACTTCTTGT GAGATTTCCA
  CAGTGCCTGG GCATGCTGTG AAAGCCAAGG AGGAGGGGCG CCTGGAATAC TTTGCAGCTA
  TGTATGGGGC ATTCTTTCTG AGCATTTCAG TCCAGGGCAC ACAGGAGGAA ACTTCCAAAG
  G
  TGAAGTCTCA ACATTTCTGC TGGTCCCCAC TGAGTTTGTG TCAAGAAACA CACACATACA
  GAAAGAGAGA TGGGGGGTAT TTTTACTTCA TTTCTGTCTG TTTATGGGGG ATTTTCCTGC
  TGTTAGAGGG TGGAAAAATA AATGATTACT CACAAACATC TACTTCAGCC CAAGACTCAC
  TCTCATCTCC AAGATTCCCA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147480361	ENSMUSSNP3977580	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs48911988					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125373696 () rs orientation: forward

Symbol	Name	Function Class
Gm75244	predicted gene, 75244	within coordinates
Rr564232	regulatory region 564232	788 bp distal