rs48905370 SNP Detail

Summary

• ID
  rs48905370
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162069896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGAATGCCCT CATCTCCAAC CCACCGGTCC ACTCTGCCCT
  GTGGAGGTAT CTGACACTCC TGCGGATTTT CCCGGGTCAG GAGGTATTAT TTTTCAACCT
  T
  ATAGGCTCAC TCAGCTTTTG CATTATCTAG ATTCATAGTT GCAGCTGGAG AGTCTTCCTT
  TCTTGCTAGT CTGGGGAGCT CATTTTGGCA TCACTTCTGC C                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145932128	ENSMUSSNP6485077	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48905370					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162069896 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnm3	dynamin 3			Intron
				Noncoding-Transcript-Variant
Rr372349	regulatory region 372349			585 bp upstream
Rr421941	regulatory region 421941			948 bp proximal