rs48860991 SNP Detail

Summary

• ID
  rs48860991
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:57598143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TAGAGCAAAG GGAAGAAAGC TTATATAGGG TTCTTAACTT
  GGATTCCATT GTTTCCATAA GCTTATAAAT AGATGTTAGC CGGGAAAAAA AACCTTACAC
  C
  TTCATTTTTT TAAAATGTAT TATTTGCATT TTATGTGTGC GAGTGCTTTG TTTGTATGTC
  TGTCTACCAC ATGTGTACTT GGAACCTGGG GATGTTAGAA G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135203825	ENSMUSSNP2681635	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48860991					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57598143 () rs orientation: forward

Symbol	Name	Function Class
Ankub1	ankyrin repeat and ubiquitin domain containing 1	Intron
Rr577155	regulatory region 577155	1118 bp proximal
Tssr33337	transcription start site region 33337	1805 bp downstream