rs48852963 SNP Detail

Summary

• ID
  rs48852963
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:181208313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACTACAGTT CACTGCCCAT CAGCCAGGGC CTCCTCCCTT
  AAACCTGAAC ACCAGCTGGG CCAATTCCAG GACAGCCAGG GCTACACAGA GAAACCCTGT
  Y
  TCAAAAAACC GGAACCAAGG GCTGGTGAGA TGGCTCAGTG GGTTAGAGCA CCTGACTGCT
  CTTCCGAAGG TCCAGAGTTC AAATCCCAGC AACCACATG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148402202	ENSMUSSNP4090480	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48852963					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:181208313 () rs orientation: forward

Symbol	Name	Function Class
Rr573031	regulatory region 573031	1805 bp proximal
Rr573032	regulatory region 573032	1896 bp proximal